Cells, growing old

Biology Level 4

In conditions of abundant food supply, bacteria like Escherichia coli and Pseudomonas aeruginosa reproduce by dividing into two identical daughter cells at regular intervals T d T_d , referred to as their doubling time. Assume that a large number of E. coli are growing in a batch culture with abundant food supply and that they've reached a steady state, i.e. the fraction of cells that are x % x\% of a doubling time old, ϕ x \displaystyle\phi_x , is constant in time. To the nearest minute, what is the age of the average cell if the doubling time is 60 minutes?


The answer is 27.

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2 solutions

Josh Silverman Staff
Dec 19, 2013

As each cell reproduces once every doubling time, we can write the number of cells at time t t as N ( t ) = N i 2 t / T d N i e μ t N(t) = N_i2^{t/T_d}\equiv N_ie^{\mu t} where μ = ln 2 T d \mu = \frac{\ln 2}{T_d}

Suppose at time t t in a bacterial culture with growth rate μ \mu , the fraction ϕ a ( t ) \phi_a(t) cells are of the age a a . If we let a small time Δ t \Delta t pass, the culture will grow by the factor e μ Δ t e^{\mu \Delta t} . However, all the same cells which were in the fraction of cells age a a at t t will be in the fraction of cells age a + Δ t a+\Delta t at time t + Δ t t+\Delta t . Therefore, we have:

ϕ a + Δ t ( t + Δ t ) = e μ Δ t ϕ a ( t ) \phi_{a+\Delta t}(t+\Delta t) = e^{-\mu\Delta t}\phi_a(t)

However, the fraction of cells of a given age does not change over time (as we are in the steady state), so the distribution is time independent, and we have:

ϕ a + Δ t = e μ Δ t ϕ a \phi_{a+\Delta t} = e^{-\mu\Delta t}\phi_a

We could solve this relation with calculus, or we can simply observe that this equation is satisfied if ϕ m = e μ m \phi_m = e^{-\mu m} . Therefore, the fraction of cells of age a a is proportional to e μ a e^{-\mu a}

By definition, all cells are aged between 0 and T d T_d . Therefore, we can normalize the age distribution over the interval [ 0 , T d ] \left[0,T_d\right] to obtain the fully quantitative age distribution of the cells.

1 = C 0 T d e μ a d a = C ( 1 e μ T d μ ) = C T d 2 ln 2 \displaystyle 1 = C \int \limits_0^{T_d} e^{-\mu a} da = C \left( \frac{ 1 - e^{-\mu T_d} }{\mu} \right) = C \cdot \frac{T_d}{2\ln 2}

which shows that C 2 ln 2 T d C \equiv \frac{2\ln 2}{T_d} . Hence, the age distribution is given by ϕ a = 2 ln 2 T d e μ a \displaystyle \phi_a = \frac{2 \ln 2}{T_d} e^{-\mu a} or 2 μ e μ a \displaystyle 2\mu e^{-\mu a}

The average cell age a \langle a\rangle is given by

0 T d a ϕ a d a \displaystyle\int\limits_0^{T_d}a\phi_a da

which we can calculate directly

Rewriting the expression slightly, we have

2 μ [ a e μ a d a ] 0 T d \displaystyle 2\mu \left[\int a e^{-\mu a} da \right]_0^{T_d}

The bracketed indefinite integral can be solved by differentiating under the integral sign. We recognize that a e μ a ae^{-\mu a} is the derivative of e μ a -e^{-\mu a} with respect to μ \mu . Thus

a e μ a d a = d d μ e μ a d a = d d μ e μ a d a \displaystyle \int a e^{-\mu a} da = -\int \frac{d}{d\mu}e^{-\mu a} da = -\frac{d}{d\mu} \int e^{-\mu a} da

The derivative can be pulled in front of the integral as it is on μ \mu while the integral is over a a .

The integral e μ a d a \displaystyle \int e^{-\mu a} da is easy and is equal to e μ a μ \displaystyle \frac{-e^{-\mu a}}{\mu}

Now, we evaluate the expression and recall μ = ln 2 T d \displaystyle \mu = \frac{\ln 2}{T_d} .

a = 2 μ [ 1 μ 2 T d e μ T d μ e μ T d μ 2 ] = 2 [ 1 μ T d e μ T d e μ T d μ ] = 2 [ T d ln 2 T d 2 T d 2 ln 2 ] = T d ( 1 ln 2 1 ) \begin{aligned} \langle a \rangle =& 2\mu \left[\frac{1}{\mu^2} - T_d\frac{e^{-\mu T_d}}{\mu} - \frac{e^{-\mu T_d}}{\mu^2} \right] \\ =& 2 \left[ \frac{1}{\mu} - T_d e^{-\mu T_d} - \frac{e^{-\mu T_d}}{\mu} \right] \\ =& 2 \left[ \frac{T_d}{\ln 2} - \frac{T_d}{2} - \frac{T_d}{2\ln2}\right] \\ =& \boxed{T_d\left(\frac{1}{\ln 2} - 1\right)} \\ \end{aligned}

Therefore, the average cell age is roughly equal to 44 100 T d \displaystyle\frac{44}{100} T_d , or 44 % 44\% of one doubling time.

Interestingly, the average age is independent of how quickly the cell culture is growing and is slightly less than halfway between birth and division.

Bio problems standing up for level 3 physics sums..!!!

Harshita Herle - 7 years, 1 month ago

The probability distribution is an exponential curve from x = 0 to 1 where P(0) = 2 * P(1). using calculus we can show that mean x is 1/ln2 - 1. The mean age is 60(1/ln2 -1) = 26.56 or roughly 27 minutes

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